La maladie de Parkinson au Canada (serveur d'exploration)

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Estimation of gillnet efficiency and selectivity across multiple sampling units: A hierarchical Bayesian analysis using mark-recapture data

Identifieur interne : 000227 ( France/Analysis ); précédent : 000226; suivant : 000228

Estimation of gillnet efficiency and selectivity across multiple sampling units: A hierarchical Bayesian analysis using mark-recapture data

Auteurs : P. J. Askey [Canada] ; J. R. Post [Canada] ; E. A. Parkinson [Canada] ; Etienne Rivot [France] ; A. J. Paul [Canada] ; P. A. Biro [Canada]

Source :

RBID : Hal:hal-01453589

Descripteurs français

English descriptors

Abstract

Fisheries research often involves a repetitive sampling protocol for multiple ecological units (our example is gillnetting of lakes). Estimates of abundance based on catch per unit effort can be erroneous due to lake effects on sampling efficiency. Conversely dividing data into individual lakes may lead to poor inference due to sparse data. Hierarchical Bayesian analysis compromises between these two extreme methods by estimating parameters for an individual lake, but borrowing information from other lakes. We estimated size-selective gillnet efficiency with mark-recapture data across a series of lakes subject to a constant netting effort. Hierarchical Bayesian analysis was able to prevent unrealistic selectivity functions that arose from individual lake analysis. Furthermore, the hierarchical approach was able to derive accurate parameter estimates with very few mark-recaptures in sub-sampled data trials. This paper demonstrates the hierarchical methodology for the estimation of fishery selectivity parameters. The results could be used to derive informative priors for future research which uses the proposed gillnet protocol.

Url:
DOI: 10.1016/j.fishres.2006.09.009


Affiliations:


Links toward previous steps (curation, corpus...)


Links to Exploration step

Hal:hal-01453589

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Estimation of gillnet efficiency and selectivity across multiple sampling units: A hierarchical Bayesian analysis using mark-recapture data</title>
<author>
<name sortKey="Askey, P J" sort="Askey, P J" uniqKey="Askey P" first="P. J." last="Askey">P. J. Askey</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-481918" status="INCOMING">
<orgName>Department of Biological Sciences</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
<listRelation>
<relation active="#struct-467001" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle active="#struct-467001" type="direct">
<org type="institution" xml:id="struct-467001" status="INCOMING">
<orgName>University of Calgary</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Canada</country>
<placeName>
<settlement type="city">Calgary</settlement>
<region type="state">Alberta</region>
</placeName>
<orgName type="university">Université de Calgary</orgName>
</affiliation>
</author>
<author>
<name sortKey="Post, J R" sort="Post, J R" uniqKey="Post J" first="J. R." last="Post">J. R. Post</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-481918" status="INCOMING">
<orgName>Department of Biological Sciences</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
<listRelation>
<relation active="#struct-467001" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle active="#struct-467001" type="direct">
<org type="institution" xml:id="struct-467001" status="INCOMING">
<orgName>University of Calgary</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Canada</country>
<placeName>
<settlement type="city">Calgary</settlement>
<region type="state">Alberta</region>
</placeName>
<orgName type="university">Université de Calgary</orgName>
</affiliation>
</author>
<author>
<name sortKey="Parkinson, E A" sort="Parkinson, E A" uniqKey="Parkinson E" first="E. A." last="Parkinson">E. A. Parkinson</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-481918" status="INCOMING">
<orgName>Department of Biological Sciences</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
<listRelation>
<relation active="#struct-467001" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle active="#struct-467001" type="direct">
<org type="institution" xml:id="struct-467001" status="INCOMING">
<orgName>University of Calgary</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Canada</country>
<placeName>
<settlement type="city">Calgary</settlement>
<region type="state">Alberta</region>
</placeName>
<orgName type="university">Université de Calgary</orgName>
</affiliation>
</author>
<author>
<name sortKey="Rivot, Etienne" sort="Rivot, Etienne" uniqKey="Rivot E" first="Etienne" last="Rivot">Etienne Rivot</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-116016" status="VALID">
<orgName>Écologie et santé des écosystèmes</orgName>
<orgName type="acronym">ESE</orgName>
<desc>
<address>
<addrLine>AGROCAMPUS OUEST Centre de Rennes 65 rue de Saint-Brieuc 35042 Rennes cedex</addrLine>
<country key="FR"></country>
</address>
<ref type="url">http://www.agrocampus-ouest.fr/infoglueDeliverLive/digitalAssets/5333_UMR_ESE.pdf</ref>
</desc>
<listRelation>
<relation name="UMR985" active="#struct-92114" type="direct"></relation>
<relation active="#struct-108028" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle name="UMR985" active="#struct-92114" type="direct">
<org type="institution" xml:id="struct-92114" status="VALID">
<orgName>Institut National de la Recherche Agronomique</orgName>
<orgName type="acronym">INRA</orgName>
<desc>
<address>
<country key="FR"></country>
</address>
<ref type="url">http://www.inra.fr</ref>
</desc>
</org>
</tutelle>
<tutelle active="#struct-108028" type="direct">
<org type="institution" xml:id="struct-108028" status="VALID">
<orgName>AGROCAMPUS OUEST</orgName>
<desc>
<address>
<addrLine>Institut Supérieur des Sciences Agronomiques, Agroalimentaires, Horticoles et du Paysage - 65, rue de St Brieuc - CS 84215 - 35042 Rennes cedex</addrLine>
<country key="FR"></country>
</address>
<ref type="url">http://www.agrocampus-ouest.fr/</ref>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>France</country>
</affiliation>
</author>
<author>
<name sortKey="Paul, A J" sort="Paul, A J" uniqKey="Paul A" first="A. J." last="Paul">A. J. Paul</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-481918" status="INCOMING">
<orgName>Department of Biological Sciences</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
<listRelation>
<relation active="#struct-467001" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle active="#struct-467001" type="direct">
<org type="institution" xml:id="struct-467001" status="INCOMING">
<orgName>University of Calgary</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Canada</country>
<placeName>
<settlement type="city">Calgary</settlement>
<region type="state">Alberta</region>
</placeName>
<orgName type="university">Université de Calgary</orgName>
</affiliation>
</author>
<author>
<name sortKey="Biro, P A" sort="Biro, P A" uniqKey="Biro P" first="P. A." last="Biro">P. A. Biro</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-481918" status="INCOMING">
<orgName>Department of Biological Sciences</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
<listRelation>
<relation active="#struct-467001" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle active="#struct-467001" type="direct">
<org type="institution" xml:id="struct-467001" status="INCOMING">
<orgName>University of Calgary</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Canada</country>
<placeName>
<settlement type="city">Calgary</settlement>
<region type="state">Alberta</region>
</placeName>
<orgName type="university">Université de Calgary</orgName>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">HAL</idno>
<idno type="RBID">Hal:hal-01453589</idno>
<idno type="halId">hal-01453589</idno>
<idno type="halUri">https://hal.archives-ouvertes.fr/hal-01453589</idno>
<idno type="url">https://hal.archives-ouvertes.fr/hal-01453589</idno>
<idno type="doi">10.1016/j.fishres.2006.09.009</idno>
<date when="2007">2007</date>
<idno type="wicri:Area/Hal/Corpus">000002</idno>
<idno type="wicri:Area/Hal/Curation">000002</idno>
<idno type="wicri:Area/Hal/Checkpoint">000003</idno>
<idno type="wicri:explorRef" wicri:stream="Hal" wicri:step="Checkpoint">000003</idno>
<idno type="wicri:doubleKey">0165-7836:2007:Askey P:estimation:of:gillnet</idno>
<idno type="wicri:Area/Main/Merge">002637</idno>
<idno type="wicri:Area/Main/Curation">002421</idno>
<idno type="wicri:Area/Main/Exploration">002421</idno>
<idno type="wicri:Area/France/Extraction">000227</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Estimation of gillnet efficiency and selectivity across multiple sampling units: A hierarchical Bayesian analysis using mark-recapture data</title>
<author>
<name sortKey="Askey, P J" sort="Askey, P J" uniqKey="Askey P" first="P. J." last="Askey">P. J. Askey</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-481918" status="INCOMING">
<orgName>Department of Biological Sciences</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
<listRelation>
<relation active="#struct-467001" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle active="#struct-467001" type="direct">
<org type="institution" xml:id="struct-467001" status="INCOMING">
<orgName>University of Calgary</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Canada</country>
<placeName>
<settlement type="city">Calgary</settlement>
<region type="state">Alberta</region>
</placeName>
<orgName type="university">Université de Calgary</orgName>
</affiliation>
</author>
<author>
<name sortKey="Post, J R" sort="Post, J R" uniqKey="Post J" first="J. R." last="Post">J. R. Post</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-481918" status="INCOMING">
<orgName>Department of Biological Sciences</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
<listRelation>
<relation active="#struct-467001" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle active="#struct-467001" type="direct">
<org type="institution" xml:id="struct-467001" status="INCOMING">
<orgName>University of Calgary</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Canada</country>
<placeName>
<settlement type="city">Calgary</settlement>
<region type="state">Alberta</region>
</placeName>
<orgName type="university">Université de Calgary</orgName>
</affiliation>
</author>
<author>
<name sortKey="Parkinson, E A" sort="Parkinson, E A" uniqKey="Parkinson E" first="E. A." last="Parkinson">E. A. Parkinson</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-481918" status="INCOMING">
<orgName>Department of Biological Sciences</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
<listRelation>
<relation active="#struct-467001" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle active="#struct-467001" type="direct">
<org type="institution" xml:id="struct-467001" status="INCOMING">
<orgName>University of Calgary</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Canada</country>
<placeName>
<settlement type="city">Calgary</settlement>
<region type="state">Alberta</region>
</placeName>
<orgName type="university">Université de Calgary</orgName>
</affiliation>
</author>
<author>
<name sortKey="Rivot, Etienne" sort="Rivot, Etienne" uniqKey="Rivot E" first="Etienne" last="Rivot">Etienne Rivot</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-116016" status="VALID">
<orgName>Écologie et santé des écosystèmes</orgName>
<orgName type="acronym">ESE</orgName>
<desc>
<address>
<addrLine>AGROCAMPUS OUEST Centre de Rennes 65 rue de Saint-Brieuc 35042 Rennes cedex</addrLine>
<country key="FR"></country>
</address>
<ref type="url">http://www.agrocampus-ouest.fr/infoglueDeliverLive/digitalAssets/5333_UMR_ESE.pdf</ref>
</desc>
<listRelation>
<relation name="UMR985" active="#struct-92114" type="direct"></relation>
<relation active="#struct-108028" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle name="UMR985" active="#struct-92114" type="direct">
<org type="institution" xml:id="struct-92114" status="VALID">
<orgName>Institut National de la Recherche Agronomique</orgName>
<orgName type="acronym">INRA</orgName>
<desc>
<address>
<country key="FR"></country>
</address>
<ref type="url">http://www.inra.fr</ref>
</desc>
</org>
</tutelle>
<tutelle active="#struct-108028" type="direct">
<org type="institution" xml:id="struct-108028" status="VALID">
<orgName>AGROCAMPUS OUEST</orgName>
<desc>
<address>
<addrLine>Institut Supérieur des Sciences Agronomiques, Agroalimentaires, Horticoles et du Paysage - 65, rue de St Brieuc - CS 84215 - 35042 Rennes cedex</addrLine>
<country key="FR"></country>
</address>
<ref type="url">http://www.agrocampus-ouest.fr/</ref>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>France</country>
</affiliation>
</author>
<author>
<name sortKey="Paul, A J" sort="Paul, A J" uniqKey="Paul A" first="A. J." last="Paul">A. J. Paul</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-481918" status="INCOMING">
<orgName>Department of Biological Sciences</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
<listRelation>
<relation active="#struct-467001" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle active="#struct-467001" type="direct">
<org type="institution" xml:id="struct-467001" status="INCOMING">
<orgName>University of Calgary</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Canada</country>
<placeName>
<settlement type="city">Calgary</settlement>
<region type="state">Alberta</region>
</placeName>
<orgName type="university">Université de Calgary</orgName>
</affiliation>
</author>
<author>
<name sortKey="Biro, P A" sort="Biro, P A" uniqKey="Biro P" first="P. A." last="Biro">P. A. Biro</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-481918" status="INCOMING">
<orgName>Department of Biological Sciences</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
<listRelation>
<relation active="#struct-467001" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle active="#struct-467001" type="direct">
<org type="institution" xml:id="struct-467001" status="INCOMING">
<orgName>University of Calgary</orgName>
<desc>
<address>
<country key="CA"></country>
</address>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Canada</country>
<placeName>
<settlement type="city">Calgary</settlement>
<region type="state">Alberta</region>
</placeName>
<orgName type="university">Université de Calgary</orgName>
</affiliation>
</author>
</analytic>
<idno type="DOI">10.1016/j.fishres.2006.09.009</idno>
<series>
<title level="j">Fisheries Research</title>
<idno type="ISSN">0165-7836</idno>
<imprint>
<date type="datePub">2007</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="mix" xml:lang="en">
<term> rainbow</term>
<term>CAPTURABILITE</term>
<term>CAPTURE-MARQUAGE-RECAPTURE</term>
<term>MODELE HIERARCHIQUE</term>
<term>SELECTIVITE DES CAPTURES</term>
<term>STATISTIQUE BAYESIENNE</term>
<term>fish</term>
<term>lake and pond</term>
<term>rainbow trout</term>
<term>trout </term>
</keywords>
<keywords scheme="mix" xml:lang="fr">
<term>amérique du nord</term>
<term>canada</term>
<term>lac et étang</term>
<term>oncorhynchus mykiss</term>
<term>poisson</term>
<term>truite arc en ciel</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Fisheries research often involves a repetitive sampling protocol for multiple ecological units (our example is gillnetting of lakes). Estimates of abundance based on catch per unit effort can be erroneous due to lake effects on sampling efficiency. Conversely dividing data into individual lakes may lead to poor inference due to sparse data. Hierarchical Bayesian analysis compromises between these two extreme methods by estimating parameters for an individual lake, but borrowing information from other lakes. We estimated size-selective gillnet efficiency with mark-recapture data across a series of lakes subject to a constant netting effort. Hierarchical Bayesian analysis was able to prevent unrealistic selectivity functions that arose from individual lake analysis. Furthermore, the hierarchical approach was able to derive accurate parameter estimates with very few mark-recaptures in sub-sampled data trials. This paper demonstrates the hierarchical methodology for the estimation of fishery selectivity parameters. The results could be used to derive informative priors for future research which uses the proposed gillnet protocol. </div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>Canada</li>
<li>France</li>
</country>
<region>
<li>Alberta</li>
</region>
<settlement>
<li>Calgary</li>
</settlement>
<orgName>
<li>Université de Calgary</li>
</orgName>
</list>
<tree>
<country name="Canada">
<region name="Alberta">
<name sortKey="Askey, P J" sort="Askey, P J" uniqKey="Askey P" first="P. J." last="Askey">P. J. Askey</name>
</region>
<name sortKey="Biro, P A" sort="Biro, P A" uniqKey="Biro P" first="P. A." last="Biro">P. A. Biro</name>
<name sortKey="Parkinson, E A" sort="Parkinson, E A" uniqKey="Parkinson E" first="E. A." last="Parkinson">E. A. Parkinson</name>
<name sortKey="Paul, A J" sort="Paul, A J" uniqKey="Paul A" first="A. J." last="Paul">A. J. Paul</name>
<name sortKey="Post, J R" sort="Post, J R" uniqKey="Post J" first="J. R." last="Post">J. R. Post</name>
</country>
<country name="France">
<noRegion>
<name sortKey="Rivot, Etienne" sort="Rivot, Etienne" uniqKey="Rivot E" first="Etienne" last="Rivot">Etienne Rivot</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Canada/explor/ParkinsonCanadaV1/Data/France/Analysis
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000227 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/France/Analysis/biblio.hfd -nk 000227 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Canada
   |area=    ParkinsonCanadaV1
   |flux=    France
   |étape=   Analysis
   |type=    RBID
   |clé=     Hal:hal-01453589
   |texte=   Estimation of gillnet efficiency and selectivity across multiple sampling units: A hierarchical Bayesian analysis using mark-recapture data
}}

Wicri

This area was generated with Dilib version V0.6.29.
Data generation: Thu May 4 22:20:19 2017. Site generation: Fri Dec 23 23:17:26 2022